​Protocols

Whole Genome Sequencing

Please find information related to WGS as well as a protocol for 'Whole Genome Sequencing and Bioinformatic Analysis of Bacterial Isolates Related to the EU Monitoring of Antimicrobial Resistance' under the WGS-tab (link)

ESBL-, ampC- and carbapenemase-producing E. coli

Campylobacter

Protocol ​for isolation, identification and storage of Campylobacter jejuni and/or C. coli for the EU monitoring of antimicrobial resistance (please access the document via this link to the webpage of the EURL Campylobacter)

The protocol and the work it was based on was presented by Hanna Skarin from the EURL Campylobacter working group at a webinar held on 5 May 2021. See the presentation via this link

Enterococcus speciation and Campylobacter species ID

Disclaimer​

​Information presented on this website is considered public information (unless otherwise noted) and may be distributed or copied. Use of appropriate byline/photo/image credit is requested. While The National Food Institute makes every effort to provide accurate and complete information, various data such as names, telephone numbers, etc. may change prior to updating. The National Food Institute welcomes suggestions on how to improve our home page and correct errors. The National Food Institute provides no warranty, expressed or implied, as to the accuracy, reliability or completeness of furnished data.

Some of the documents on this server may contain live references (or pointers) to information created and maintained by other organizations. Please note that The National Food Institute does not control and cannot guarantee the relevance, timeliness, or accuracy of these outside materials.

Information​

Technical University of Denmark, National Food Institute

CVR: 30060946

AdDress

Denmark

DK-2800 Lyngby

Kemitorvet, Building 204​

Contact us

Tlf.: +45 3588 6601

E-mail: suska@food.dtu.dk